Address

Contact

Email: ng478@drexel.edu

Natasha Vergara

Ph.D. Student

2016-
“Computational Drug Design with Machine Learning”

Publications:

J. Prévost, J. Richard, R. Gasser, S. Ding, C. Fage, S. P. Anand, D. Adam, N. G. Vergara, A. Tauzin, M. Benlarbi, S. Y. Gong, G. Goyette, A. Privé, S. Moreira, H. Charest, M. Roger, W. Mothes, M. Pazgier, E. Brochiero, G. Boivin, C. F. Abrams, A. Schön, and A. and Finzi, “Impact of temperature on the affinity of SARS-CoV-2 Spike glycoprotein for host ACE2,” Journal of Biological Chemistry, vol. 297, iss. 4, p. 11051, 2021. [Bibtex] [doi]
@article{Prevost2021,
author = {Jérémie Prévost and Jonathan Richard and Romain Gasser and Shilei Ding and
Clément Fage and Sai Priya Anand and Damien Adam and Natasha Gupta Vergara and Alexandra Tauzin and
Mehdi Benlarbi and Shang Yu Gong and Guillaume Goyette and Anik Privé and Sandrine Moreira and
Hugues Charest and Michel Roger and Walther Mothes and Marzena Pazgier and Emmanuelle Brochiero and
Guy Boivin and Cameron F Abrams and Arne Schön and and Andrés Finzi},
title = {{Impact of temperature on the affinity of SARS-CoV-2 Spike glycoprotein for host ACE2}},
journal = {{Journal of Biological Chemistry}},
volume = {297},
pages = {11051},
number = {4},
doi = {10.1016/j.jbc.2021.101151},
url = {https://doi.org/10.1016/j.jbc.2021.101151},
year = {2021}
}

J. Prévost, W. D. Tolbert, H. Medjahed, R. T. Sherburn, N. Madani, D. Zoubchenok, G. Gendron-Lepage, A. E. Gaffney, M. C. Grenier, S. Kirk, N. Vergara, C. Han, B. T. Mann, A. L. Chénine, A. Ahmed, I. Chaiken, F. Kirchhoff, B. H. Hahn, H. Haim, C. F. Abrams, A. B. Smith, J. Sodroski, M. Pazgier, and A. Finzi, “The HIV-1 Env gp120 inner domain shapes the Phe43 cavity and the CD4 binding site,” mBio, vol. 11, iss. 3, p. e00280-20, 2020. [Bibtex] [doi]
@article{Prevost_2020,
doi = {10.1128/mbio.00280-20},
url = {https://doi.org/10.1128%2Fmbio.00280-20},
year = 2020,
month = {may},
publisher = {American Society for Microbiology},
volume = {11},
number = {3},
author = {J{\'{e}}r{\'{e}}mie Pr{\'{e}}vost and William D. Tolbert and Halima Medjahed and Rebekah T. Sherburn and Navid Madani and Daria Zoubchenok and Gabrielle Gendron-Lepage and Althea E. Gaffney and Melissa C. Grenier and Sharon Kirk and Natasha Vergara and Changze Han and Brendan T. Mann and Agn{\`{e}}s L. Ch{\'{e}}nine and Adel Ahmed and Irwin Chaiken and Frank Kirchhoff and Beatrice H. Hahn and Hillel Haim and Cameron F. Abrams and Amos B. Smith and Joseph Sodroski and Marzena Pazgier and Andr{\'{e}}s Finzi},
editor = {Tongqing Zhou and Thomas E. Smithgall},
title = {The {HIV}-1 {Env} gp120 Inner Domain Shapes the {P}he43 Cavity and the {CD}4 Binding Site},
journal = {{mBio}},
pages = {e00280-20}
}

A. S. Sridhar, E. Kinaci, J. Vergara, G. Palmese, and C. F. Abrams, “The effect of alkyl chain length on mechanical properties of fatty-acid-functionalized amidoamine-epoxy systems,” Computational Materials Science, vol. 150, p. 70–76, 2018. [Bibtex] [doi]
@article{Srikanth_2018,
doi = {10.1016/j.commatsci.2018.03.073},
url = {https://doi.org/10.1016%2Fj.commatsci.2018.03.073},
year = 2018,
month = {jul},
publisher = {Elsevier {BV}},
volume = {150},
pages = {70--76},
author = {Arun Srikanth Sridhar and Emre Kinaci and John Vergara and Giuseppe Palmese and Cameron F. Abrams},
title = {The effect of alkyl chain length on mechanical properties of fatty-acid-functionalized amidoamine-epoxy systems},
journal = {{Computational Materials Science}}
}

A. S. Sridhar, J. Vergara, G. Palmese, and C. F. Abrams, “The effect of alkyl chain length on material properties of fatty-acid-functionalized amidoamine-epoxy systems,” European Polymer Journal, vol. 89, p. 1–12, 2017. [Bibtex] [doi]
@article{Srikanth_2017,
doi = {10.1016/j.eurpolymj.2017.01.037},
url = {https://doi.org/10.1016%2Fj.eurpolymj.2017.01.037},
year = 2017,
month = {apr},
publisher = {Elsevier {BV}},
volume = {89},
pages = {1--12},
author = {Arun Srikanth Sridhar and John Vergara and Giuseppe Palmese and Cameron F. Abrams},
title = {The effect of alkyl chain length on material properties of fatty-acid-functionalized amidoamine-epoxy systems},
journal = {{European Polymer Journal}}
}